Index

A

add_molecule() (pymolpro.database.Database method) add_reaction() (pymolpro.database.Database method) add_reference() (pymolpro.database.Database method) add_subset() (pymolpro.database.Database method)

analyse() (in module pymolpro.database) attribute() (pymolpro.Orbital method) axes (pymolpro.Orbital property) (pymolpro.Pair property) AxesXml (class in pymolpro.node_xml)

B

backend_get() (pymolpro.project.Project method) backend_names() (pymolpro.project.Project method) backend_parameter_default() (pymolpro.project.Project method) backend_parameter_delete() (pymolpro.project.Project method) backend_parameter_documentation() (pymolpro.project.Project method) backend_parameter_get() (pymolpro.project.Project method)

backend_parameter_set() (pymolpro.project.Project method) backend_parameters() (pymolpro.project.Project method) basis (pymolpro.database.Database attribute) basis_extrapolate() (in module pymolpro.database) basis_registry() (pymolpro.project.Project method) BasisSetXml (class in pymolpro.node_xml) builtins (pymolpro.project.Project attribute)

C

calculate_reaction_energies() (pymolpro.database.Database method) centroid (pymolpro.Orbital attribute) child() (pymolpro.project.Project method) clean() (pymolpro.project.Project method) CmlAtomXml (class in pymolpro.node_xml) CmlMoleculeXml (class in pymolpro.node_xml)

commandify_method() (pymolpro.project.Project method) completed() (pymolpro.project.Project method) copy() (pymolpro.database.Database method) (pymolpro.project.Project method) copy_node() (pymolpro.project.Project method) CubeXml (class in pymolpro.node_xml) cubical_grid() (in module pymolpro.grid)

D

Database (class in pymolpro.database) DateXml (class in pymolpro.node_xml) description (pymolpro.database.Database attribute)

DiagnosticsXml (class in pymolpro.node_xml) DimensionsXml (class in pymolpro.node_xml) dump() (pymolpro.database.Database method)

E

element_to_dict() (in module pymolpro) (in module pymolpro.project) energies() (pymolpro.project.Project method) energy (pymolpro.Tuple attribute) energy() (pymolpro.project.Project method) erase() (pymolpro.project.Project method)

errors() (pymolpro.project.Project method) evaluate() (pymolpro.Orbital method) evaluateBasis() (in module pymolpro.grid) evaluateOrbitals() (in module pymolpro.grid) (pymolpro.project.Project method) export_file() (pymolpro.project.Project method)

F

failed (pymolpro.database.Database attribute) FieldXml (class in pymolpro.node_xml)

filename() (pymolpro.project.Project method) findall() (pymolpro.project.Project method)

G

geometries() (pymolpro.project.Project method) geometry() (pymolpro.project.Project method)

gradient() (pymolpro.project.Project method) grid() (pymolpro.Orbital method)

I

ID (pymolpro.Orbital property) import_file() (pymolpro.project.Project method) import_input() (pymolpro.project.Project method)

input_file_path (pymolpro.project.Project property) input_from_output() (pymolpro.project.Project method) InputXml (class in pymolpro.node_xml)

J

JobstepXml (class in pymolpro.node_xml)

K

kill() (pymolpro.project.Project method)

kinetic_energy (pymolpro.Orbital property)

L

LicenceXml (class in pymolpro.node_xml) list_files() (pymolpro.project.Project method) load() (in module pymolpro.database) (pymolpro.database.Database method)

local_molpro_root (pymolpro.project.Project property) local_orbital_axes (pymolpro.Pair property) local_second_moments (pymolpro.Orbital property) location (pymolpro.project.Project property)

M

MachineXml (class in pymolpro.node_xml) method (pymolpro.database.Database attribute) method_from_commands() (in module pymolpro.project) module pymolpro pymolpro.database pymolpro.grid pymolpro.node_xml pymolpro.project

molecule_energies (pymolpro.database.Database attribute) molecules (pymolpro.database.Database attribute) MoleculeXml (class in pymolpro.node_xml) move() (pymolpro.project.Project method)

N

name (pymolpro.project.Project property) no_errors() (in module pymolpro) (in module pymolpro.project)

NormalCoordinateXml (class in pymolpro.node_xml)

O

occupation (pymolpro.Orbital attribute) options (pymolpro.database.Database attribute) Orbital (class in pymolpro) orbitals (pymolpro.Tuple attribute) orbitals() (pymolpro.project.Project method)

OrbitalsXml (class in pymolpro.node_xml) OrbitalXml (class in pymolpro.node_xml) OriginXml (class in pymolpro.node_xml) out (pymolpro.project.Project property) output (pymolpro.project.Project property) output_file_path (pymolpro.project.Project property)

P

Pair (class in pymolpro) pairs() (pymolpro.project.Project method) ParallelXml (class in pymolpro.node_xml) parse() (pymolpro.project.Project method) parse_ansatz() (pymolpro.project.Project method) PlatformXml (class in pymolpro.node_xml) PlotXml (class in pymolpro.node_xml) preamble (pymolpro.database.Database attribute) procedures_registry() (pymolpro.project.Project method) Project (class in pymolpro.project) Project() (in module pymolpro) project_directory (pymolpro.database.Database attribute) projects (pymolpro.database.Database attribute) properties() (pymolpro.project.Project method) properties_old() (pymolpro.project.Project method)

property() (pymolpro.project.Project method) property_delete() (pymolpro.project.Project method) property_get() (pymolpro.project.Project method) property_names() (pymolpro.project.Project method) property_set() (pymolpro.project.Project method) PropertyXml (class in pymolpro.node_xml) pymolpro module pymolpro.database module pymolpro.grid module pymolpro.node_xml module pymolpro.project module

R

reaction_energies (pymolpro.database.Database attribute) reactions (pymolpro.database.Database attribute) recent_find() (pymolpro.project.Project method) references (pymolpro.database.Database attribute) refresh_backends() (pymolpro.project.Project method)

registry() (pymolpro.project.Project method) resolve_geometry() (in module pymolpro.project) run() (in module pymolpro.database) (pymolpro.project.Project method) run_local_molpro() (pymolpro.project.Project method) run_needed() (pymolpro.project.Project method)

S

second_moment_eigenvalues (pymolpro.Orbital attribute) select() (pymolpro.project.Project method) Single (class in pymolpro) singles() (pymolpro.project.Project method) spherical_grid() (in module pymolpro.grid)

spins (pymolpro.Tuple attribute) status (pymolpro.project.Project property) StepXml (class in pymolpro.node_xml) subset() (pymolpro.database.Database method) subsets (pymolpro.database.Database attribute)

T

tag_to_name() (in module pymolpro.node_xml) trash() (pymolpro.project.Project method)

tree_view() (pymolpro.project.Project method) Tuple (class in pymolpro)

U

units (in module pymolpro.database)

V

variable() (pymolpro.project.Project method) variables() (pymolpro.project.Project method) VariablesXml (class in pymolpro.node_xml) VariableXml (class in pymolpro.node_xml)

VersionXml (class in pymolpro.node_xml) vibrations (pymolpro.project.Project property) VibrationsXml (class in pymolpro.node_xml) view_input() (pymolpro.project.Project method) view_output() (pymolpro.project.Project method)

W

wait() (pymolpro.project.Project method)

write_file() (pymolpro.project.Project method) write_input() (pymolpro.project.Project method)

X

xml (pymolpro.project.Project property) xpath() (pymolpro.project.Project method) xpath_search() (pymolpro.project.Project method)

xyz() (pymolpro.project.Project method) xyz_to_zmat() (in module pymolpro) xyzs() (pymolpro.project.Project method)